Vegeta, don't know where are you located, the magnitude of the project (a "big revamp" is not quite descriptive of the complexity of the change), and the relationship between your engineering company and the refinery.
The first think to look here is the scope of the contract. If this job was not clearly specified in the contract, it should be considered a change of scope. Probably the magnitude in cost will not jeopardize the project. And the timing seems right. You are at a planning stage of the revamp. Please talk to your management. This is a scope change. Not just a "put me quick numbers together as a favor" type of job.
I don't know about people that do this type of studies exclusively on commercial basis. My reading on these type of problems has been largely academic. One group that has actualy done field jobs on this topics is Mr. Grossmann's from Carnegie Mellon. It may be a good starting point (I don't have any affiliation with Mr Grossmann).
To have an idea of the kind of issues you have at hand, see the following link
http://egon.cheme.cm...p-16_Brenno.pdf
There are also several institutes around the world that work on similar problems you may contact.
The GAMS site list partners that may also help
https://www.gams.com...on-specialists/
However, ff they want to do something by rule of thumb, using excel, probably the refinery planners are in a much better position to do it than an engineering contractor.
Beware the alligators...